Genomics Core Facility

The Genomics Core Facility in IMTM provides services using two different next-generation sequencing platforms from Illumina. Applications supported include:

• Amplicon sequencing for metagenomic studies
• Targeted sequencing of formalin fixed paraffin embedded (FFPE) samples
• Transcriptome sequencing of humans
• Whole genome sequencing of non-model organisms

Analysis from high throughput technologies is provided in cooperation with IT core facility. In addition, the Facility continues to offer a variety of traditional genetic services, including:

• Comparative genomic hybridization (CGH)
• Constructing of DNA FISH probes for designated genes/chromosomal areas
• Fluorescent in situ hybridisation (FISH)
• Fragment analysis
• Genotyping, SNPs
• High Resolution Melting Analysis (HRM)
• Karyotyping
• Microarray analysis
• Reverse transcription Real-Time quantitative PCR
• Real-Time quantitative PCR
• Sanger sequencing

For your inquiry contact:

Personnel

Head of the facility: Jiří Drábek

• Next Genome Sequencing: Rastislav Slavkovský

• Molecular genetic analysis of DNA: Jiří Drábek

• Molecular genetic analysis of RNA: Josef Srovnal

Other personnels:

Veronika Holinková

• Soňa Mlčochová

• Hana Jaworek

• Jana Stránská

• Kateřina Štaffová

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