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Academic title: Ing.
Phone: +420 585632186
Groups: IMTM, LEM, POSTDOCTORAL FELLOW, STAFF

Postdoctoral training

Status: Ongoing.

About me

I am a research scientist passionate for molecular and cellular biology, masive parallel sequencing and gene-expresion analysis. I always enjoy datamining of biologicaly relevant data and the comparison of data with already known information. I was involved in different studies such as wound healing characterization, experimental diabetes mellitus, effect of potentially active compounds or radiation on cells in vitro. I was responsible for a developement of a small laboratory for studing microbial biofilm in vitro. With my collegues, we are working on the developement of NGS methods for predicive diagnostics of cancer and methylome profiling. Recently we successfully released fastGEN NGS technology products together with our industrial partners. Currently we are also studying how the somatic mutations in blood cells that are appearing during aging and are connected to different vascular pathologic processeses. 

Journals

KLEIN, P., M. SOJKA, J. KUČERA, J. MATONOHOVA, V. PAVLIK, J. NEMEC, G. KUBICKOVA, R. SLAVKOVSKÝ, K. SZUSZKIEWICZ, P. DANEK, M. ROZKOT, V. VELEBNY
A porcine model of skin wound infected with a polybacterial biofilm. Biofouling. 2018, 34(2), 226-236, ISSN: 0892-7014, PMID: 29405092,
MODER, M., G. VELIMEZI, M. OWUSU, A. MAZOUZI, M. WIEDNER, J. FERREIRA DA SILVA, L. ROBINSON-GARCIA, F. SCHISCHLIK, R. SLAVKOVSKÝ, R. KRALOVICS, B. SCHUSTER, C. BOCK, T. IDEKER, S. JACKSON, J. MENCHE, J. LOIZOU
Parallel genome-wide screens identify synthetic viable interactions between the BLM helicase complex and Fanconi anemia. Nature Communications. 2017, 8(1), 1238, ISSN: 2041-1723, PMID: 29089570,
PLEVOVA, P., M. PAPRSKÁŘOVÁ, P. TVRDA, P. TURSKA, R. SLAVKOVSKÝ, E. MRAZKOVA
STRC Deletion is a Frequent Cause of Slight to Moderate Congenital Hearing Impairment in the Czech Republic. Otology & Neurotology. 2017, 38(10), e393-e400, ISSN: 1531-7129, PMID: 28984810,

Master mentorship

Blaťák Ondřej

Impact of Smoking on the Prevalence and Burden of Age Related Clonal Hematopoiesis in Older Individuals

Status: Ongoing from 2025.

Open positions

1 Biomarkers: Identification and validation
Project: Genetic and epigenetic biomarkers of cancer diseases
Supervisors: Slavkovský Rastislav Ph.D., Džubák Petr M.D., Ph.D., Hajdúch Marián M.D., Ph.D., Drábek Jiří Ph.D.
Available: 3
Intended for: Doctoral training
Summary: 3 places in full-time or combined form of study
1 Molecular and Translational Medicine
Project: Genetic and epigenetic biomarkers in health and disease
Supervisors: Slavkovský Rastislav Ph.D., Džubák Petr M.D., Ph.D., Hajdúch Marián M.D., Ph.D., Drábek Jiří Ph.D., Koudeláková Vladimíra Ph.D.
Available: 5
Intended for: Doctoral training