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Academic title: Ing.
Phone: +420 585632186
Groups: IMTM, LEM, POSTDOCTORAL FELLOW, STAFF

Postdoctoral training

Status: Ongoing.

About me

I am a research scientist passionate for molecular and cellular biology, masive parallel sequencing and gene-expresion analysis. I always enjoy datamining of biologicaly relevant data and the comparison of data with already known information. I was involved in different studies such as wound healing characterization, experimental diabetes mellitus, effect of potentially active compounds or radiation on cells in vitro. I was responsible for a developement of a small laboratory for studing microbial biofilm in vitro. With my collegues, we are working on the developement of NGS methods for predicive diagnostics of cancer and methylome profiling. Recently we successfully released fastGEN NGS technology products together with our industrial partners. Currently we are also studying how the somatic mutations in blood cells that are appearing during aging and are connected to different vascular pathologic processeses. 

Journals

SLAVÍK, H., V. BALIK, F. KOKAS, R. SLAVKOVSKÝ, J. VRBKOVÁ, A. ŘEHULKOVÁ, T. LAUSOVÁ, J. EHRMANN, S. GURSKÁ, I. ÜBERALL, M. HAJDÚCH, J. SROVNAL
Transcriptomic Profiling Revealed Lnc-GOLGA6A-1 as a Novel Prognostic Biomarker of Meningioma Recurrence. Neurosurgery. 2022, 91(2), 360-369, ISSN: 0148-396X, PMID: 35551164,
ŠPORIKOVÁ, Z., R. SLAVKOVSKÝ, L. TUČKOVÁ, O. KALITA, M. HOUDOVÁ MEGOVÁ, J. EHRMANN, M. HAJDÚCH, L. HRABALEK, M. VAVERKA
IDH1/2 Mutations in Patients With Diffuse Gliomas. Applied Immunohistochemistry and Molecular Morphology. 2021, 30(3), 178-183, ISSN: 1541-2016, PMID: 35262523,
SLAVKOVSKÝ, R., J. STRÁNSKÁ, V. VĚNSKOVÁ, S. JANČÍK, L. KOTKOVÁ, P. VOJTA, P. FLODR, M. BARTOUŠKOVÁ, H. ŠTUDENTOVÁ, M. HAJDÚCH, J. DRÁBEK
Development and extensive analytical validation of deep amplicon sequencing for detecting KRAS and NRAS mutations in metastatic colorectal cancer samples. Neoplasma. 2021, 69(1), 203-2015, ISSN: 0028-2685, PMID: 34881628,

Master mentorship

Podhorská Natália

Epigenetic changes detection in cancer cells

Status: Graduated from 2015 to 2017.

Csergeova Lucia

Genotyping of tumor somatic biomarkers using multi-parallel sequencing technologies with molecular barcodes features

Status: Graduated from 2019 to 2021.

Vysloužilová Lenka

Significance assessment of gene variants identified by next-generation sequencing associated with inherited cardiomyopathies

Status: Graduated from 2017 to 2019.

Bachelor mentorship

Csergeova Lucia

Genotyping of tumor biomarkers using novel multi-parallel sequencing technologies with an emphasis on ultra sesnsitive typing of circulating tumor DNA

Status: Graduated from 2017 to 2019.

Blaťák Ondřej

Novel approaches for diagnostics of mutations of genes involved in age-related clonal haematopoiesis

Status: Graduated from 2023 to 2025.

Open positions

1 Biomarkers: Identification and validation
Project: Genetic and epigenetic biomarkers of cancer diseases
Supervisors: Slavkovský Rastislav Ph.D., Džubák Petr M.D., Ph.D., Hajdúch Marián M.D., Ph.D., Drábek Jiří Ph.D.
Available: 3
Intended for: Doctoral training
Summary: 3 places in full-time or combined form of study
1 Molecular and Translational Medicine
Project: Genetic and epigenetic biomarkers in health and disease
Supervisors: Slavkovský Rastislav Ph.D., Džubák Petr M.D., Ph.D., Hajdúch Marián M.D., Ph.D., Drábek Jiří Ph.D., Koudeláková Vladimíra Ph.D.
Available: 5
Intended for: Doctoral training